Difference between revisions of "Main Page"
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<li>[[Lecture_10|Homology Modeling]] (Boris, Thursday, Oct. 12) | <li>[[Lecture_10|Homology Modeling]] (Boris, Thursday, Oct. 12) | ||
<li>[[Lecture_11|Protein Structure Prediction]] (Boris, Monday, Oct. 16) | <li>[[Lecture_11|Protein Structure Prediction]] (Boris, Monday, Oct. 16) | ||
| − | <li>[[Lecture_12|Multiple Sequence Alignment]] (Boris, Thursday, Oct. 19) | + | <li>[[Lecture_12|Multiple Sequence Alignment]] (Boris, Thursday, Oct. 19) |
| − | |||
</ol> | </ol> | ||
;Genomes | ;Genomes | ||
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<li>[[Lecture_14|Genomes]] (John, Thursday, Oct. 26) | <li>[[Lecture_14|Genomes]] (John, Thursday, Oct. 26) | ||
<li>[[Lecture_15|Functional Annotation]] (Shoshana, Monday, Oct. 30)<br> | <li>[[Lecture_15|Functional Annotation]] (Shoshana, Monday, Oct. 30)<br> | ||
| − | + | <li>[[Lecture_16|Fast Sequence Database searches]] (Boris, Thursday, Nov. 2)<br> | |
| − | <li>[[Lecture_16| | + | [[Assignment_3|'''Third Assignment''']] handed out |
</ol> | </ol> | ||
;Evolution | ;Evolution | ||
<ol start="17"> | <ol start="17"> | ||
| − | <li>[[Lecture_17| | + | <li>[[Lecture_17|Clinical Genomics]] (NN, Monday, Nov. 6) |
| − | <li>[[Lecture_18|Phylogenetic Analysis]] (Boris, Thursday, Nov. 9) | + | <li>[[Lecture_18|Phylogenetic Analysis]] (Boris, Thursday, Nov. 9) |
| − | + | <li>[[Lecture_19|Comparative Genomics]] (John, Monday, Nov.13)<br> | |
| − | <li>[[Lecture_19|Comparative Genomics]] (John, Monday, Nov.13) | + | [[Assignment_4|'''Fourth Assignment''']] handed out |
</ol> | </ol> | ||
;Systems | ;Systems | ||
<ol start="20"> | <ol start="20"> | ||
| − | <li>[[Lecture_20|Expression Analysis]] (Tim Hughes?, Thursday, Nov. 16) | + | <li>[[Lecture_20|Expression Analysis]] (Tim Hughes?, Thursday, Nov. 16)<br> |
| − | <li>[[Lecture_21| Proteomics]] (Andrew Emili?, Monday, Nov. 20) | + | [[Assignment_5|'''Fifth Assignment''']] handed out |
| − | + | <li>[[Lecture_21| Proteomics]] (Andrew Emili?, Monday, Nov. 20) | |
<li>[[Lecture_22|Gene regulation]] (Shoshana, Thursday, Nov. 23) | <li>[[Lecture_22|Gene regulation]] (Shoshana, Thursday, Nov. 23) | ||
<li>[[Lecture_23|Machine Learning: Classification and Clustering]] (Shoshana, Monday, Nov. 27) | <li>[[Lecture_23|Machine Learning: Classification and Clustering]] (Shoshana, Monday, Nov. 27) | ||
| + | [[Assignment_6|'''Sixth Assignment''']] handed out | ||
<li>[[Lecture_24|Interaction Databases]] (Shoshana, Thursday, Nov. 30) | <li>[[Lecture_24|Interaction Databases]] (Shoshana, Thursday, Nov. 30) | ||
<li>[[Lecture_25|Pathways and Networks]] (Gary Bader, Monday, Dec. 4) | <li>[[Lecture_25|Pathways and Networks]] (Gary Bader, Monday, Dec. 4) | ||
Revision as of 03:05, 2 November 2006
Welcome to the BCH441 Course Wiki, our tool to coordinate information, activities and projects.
You can browse all pages on this site, however only users with a login account can edit or contribute or edit material.
If you are here because you are interested in general aspects of bioinformatics or computational biology, you may want to review the Wikipedia article on bioinformatics, or visit Wikiomics. Contact boris.steipe(at)utoronto.ca with any questions you may have.
Contents
Organization
The first lecture of the 2006 Fall term will be held Sept. 11, 12:00.
- Dates
- Monday and Thursday, 12:00 to 13:00
- A tutorial session for Bioinformatics and Computational Biology Specialists will be offered Mondays, from 13:00 to 14:00.
- Location
- MSB 2173
See the Course Web page for information.
Schedule
(This is a preliminary schedule and changes may be made as the course progresses.)
- Organisation and Orientation (Boris, Monday, Sept. 11)
First Assignment handed out
- Sequences
- The Sequence Abstraction (Boris, Thursday, Sept. 14)
- Sequence Properties (Boris, Monday, Sept. 18)
- Sequence Analysis (Boris, Thursday, Sept. 21)
- Homology I: the principles (Boris, Monday, Sept. 25)
- Homology II: Sequence Alignment (Boris, Thursday, Sept. 28)
- Structures
- Protein Structure Databases (Boris, Monday, Oct. 2)
- Structural Domains (Boris, Thursday, Oct. 5)
Second Assignment handed out - Interpreting Protein Structure (Boris, Monday, Oct. 9)
- Homology Modeling (Boris, Thursday, Oct. 12)
- Protein Structure Prediction (Boris, Monday, Oct. 16)
- Multiple Sequence Alignment (Boris, Thursday, Oct. 19)
- Genomes
- Genome Sequencing (John, Monday, Oct. 23)
- Genomes (John, Thursday, Oct. 26)
- Functional Annotation (Shoshana, Monday, Oct. 30)
- Fast Sequence Database searches (Boris, Thursday, Nov. 2)
Third Assignment handed out
- Evolution
- Clinical Genomics (NN, Monday, Nov. 6)
- Phylogenetic Analysis (Boris, Thursday, Nov. 9)
- Comparative Genomics (John, Monday, Nov.13)
Fourth Assignment handed out
- Systems
- Expression Analysis (Tim Hughes?, Thursday, Nov. 16)
Fifth Assignment handed out - Proteomics (Andrew Emili?, Monday, Nov. 20)
- Gene regulation (Shoshana, Thursday, Nov. 23)
- Machine Learning: Classification and Clustering (Shoshana, Monday, Nov. 27) Sixth Assignment handed out
- Interaction Databases (Shoshana, Thursday, Nov. 30)
- Pathways and Networks (Gary Bader, Monday, Dec. 4)
- Computational Systems Biology (John, Thursday, Dec. 8)
In depth...
Resources
Course Wiki
- Introduction: Concept and contents of the Course Wiki
- Soapbox: A page to commmunicate. Do you want to leave a message? Alert the course members? Voice an opinion? Praise or flame? Use this page.
- Editing: Editing principles and Wiki markup syntax for the Course Wiki pages
- Sandbox: A page for your editing experiments. Content added to this page will not stay permanently.
- Feedback: Share your views on the course, suggest improvements.
Course Web
- The Course Web site.
