Difference between revisions of "User:Boris"

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*[[Cargo Cult Bioinformatics]]

Revision as of 21:16, 4 October 2014

Boris Steipe  (course coordinator)

Medical Sciences Building, Room 5279
Toronto, Ontario      M5S 1A8
T: 416-946-7741
E: boris.steipe@utoronto.ca



Extension and Template syntax


 


... under development

CSB map
00 prereading topic exercise
01 - Intro Wiki
02 Annotation Web GO, GOSemSim
03 prereading Gene lists FAA, GSEA
04 prereading Genome, transcriptome GEO (4+5)
05 prereading Proteome, Metabolome GEO 2?
06 prereading Graph theory exercise
07 prereading Interactome exercise
08 prereading Networks exercise
09 prereading Systems extraction exercise
10 prereading Dynamics exercise
11 prereading Modelling exercise
12 prereading Synthetic biology exercise






Page templates

(Copy Template location from there to edit.)

 

Original sidebar links



Quick resources


Additional BIO Topics

Additional CSB Topics

http://www.elsevier.com/wps/find/bookdescription.cws_home/707460/description

  • Elsevier - Introducing Computational Systems Biology
  • Elsevier - Enabling Information and Integration Technologies for Systems Biology:
    • Elsevier - Databases for Systems Biology.
    • Elsevier - Natural Language Processing and Ontology-enhanced Biomedical Literature Mining for Systems Biology
    • Elsevier - Integrated Imaging Informatics
    • Elsevier - Simpathica: A Computational Systems Biology Tool within the Valis Bioinformatics Environment
    • Elsevier - Standards, Platforms and Applications
  • Elsevier - Foundations of Biochemical Network Analysis and Modeling
    • Elsevier - Introduction to Computational Models of Biochemical Reaction Networks
    • Elsevier - Biological Foundations of Signal Transduction and the Systems Biology Perspective
    • Elsevier - Reconstruction of Metabolic Network from Genome Information and Its Structural and Functional Analysis
    • Elsevier - Integrated Regulatory and Metabolic Models
  • Elsevier - Computer Simulations of Dynamic Networks
    • Elsevier - A Discrete Approach to Network Modeling
    • Elsevier - Gene Networks: Estimation, Modeling and Simulation
    • Elsevier - Computational models for circadian rhythms: Deterministic versus stochastic approaches
  • Elsevier - Multi-Scale Representations of Cells and Emerging Phenotypes
    • Elsevier - Multistability and Multicellularity: Cell Fates as High-dimensional Attractors of Gene Regulatory Networks
    • Elsevier - Spatio-Temporal Systems Biology
    • Elsevier - Cytomics—from cell states to predictive medicine
    • Elsevier - The IUPS Physiome Project: Progress and Plans.


Additional APB Topics

Bioinformatics

  Biological foundations Data Analysis Interpretation
Sequences        
Structures        
Evolution        
Systems        

Utilities

PediaPress mwlib mediaWiki → eBook extension/software.


biochemistry.utoronto.ca/steipe/abc/376CEB52AF96EA94