Difference between revisions of "BIN-SEQA-Concepts"
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Time management: Before you begin, estimate how long it will take you to complete this unit. Then, record in your course journal: the number of hours you estimated, the number of hours you worked on the unit, and the amount of time that passed between start and completion of this unit.
Journal: Document your progress in your Course Journal. Some tasks may ask you to include specific items in your journal. Don't overlook these.
Insights: If you find something particularly noteworthy about this unit, make a note in your insights! page.
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Concepts of Sequence Analysis | Concepts of Sequence Analysis | ||
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(constitution cooncatenation comparison correspondence conservation composition collaboration; Web-services; analysis tools; bioinformatics.ca) | (constitution cooncatenation comparison correspondence conservation composition collaboration; Web-services; analysis tools; bioinformatics.ca) | ||
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<div style="font-size:118%;"> | <div style="font-size:118%;"> | ||
<b>Abstract:</b><br /> | <b>Abstract:</b><br /> | ||
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<section begin=deliverables /> | <section begin=deliverables /> | ||
<!-- included from "./data/ABC-unit_components.txt", section: "deliverables-time_management" --> | <!-- included from "./data/ABC-unit_components.txt", section: "deliverables-time_management" --> | ||
| − | + | <li><b>Time management</b>: Before you begin, estimate how long it will take you to complete this unit. Then, record in your course journal: the number of hours you estimated, the number of hours you worked on the unit, and the amount of time that passed between start and completion of this unit.</li> | |
<!-- included from "./data/ABC-unit_components.txt", section: "deliverables-journal" --> | <!-- included from "./data/ABC-unit_components.txt", section: "deliverables-journal" --> | ||
| − | + | <li><b>Journal</b>: Document your progress in your [[FND-Journal|Course Journal]]. Some tasks may ask you to include specific items in your journal. Don't overlook these.</li> | |
<!-- included from "./data/ABC-unit_components.txt", section: "deliverables-insights" --> | <!-- included from "./data/ABC-unit_components.txt", section: "deliverables-insights" --> | ||
| − | + | <li><b>Insights</b>: If you find something particularly noteworthy about this unit, make a note in your [[ABC-Insights|'''insights!''' page]].</li> | |
<section end=deliverables /> | <section end=deliverables /> | ||
<!-- ============================ --> | <!-- ============================ --> | ||
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<b>Prerequisites:</b><br /> | <b>Prerequisites:</b><br /> | ||
<!-- included from "./data/ABC-unit_components.txt", section: "notes-external_prerequisites" --> | <!-- included from "./data/ABC-unit_components.txt", section: "notes-external_prerequisites" --> | ||
| − | You need the following preparation before beginning this unit. If you are not familiar with this material from courses you took previously, you need to prepare yourself from other information sources: | + | You need the following preparation before beginning this unit. If you are not familiar with this material from courses you took previously, you need to prepare yourself from other information sources:<br /> |
<!-- included from "./data/ABC-unit_prerequisites.txt", section: "biomolecules" --> | <!-- included from "./data/ABC-unit_prerequisites.txt", section: "biomolecules" --> | ||
*<b>Biomolecules</b>: The molecules of life; nucleic acids and amino acids; the genetic code; protein folding; post-translational modifications and protein biochemistry; membrane proteins; biological function. | *<b>Biomolecules</b>: The molecules of life; nucleic acids and amino acids; the genetic code; protein folding; post-translational modifications and protein biochemistry; membrane proteins; biological function. | ||
<!-- included from "./data/ABC-unit_components.txt", section: "notes-prerequisites" --> | <!-- included from "./data/ABC-unit_components.txt", section: "notes-prerequisites" --> | ||
| − | This unit builds on material covered in the following prerequisite units: | + | This unit builds on material covered in the following prerequisite units:<br /> |
*[[RPR-Biostrings|RPR-Biostrings (The biostrings R Package)]] | *[[RPR-Biostrings|RPR-Biostrings (The biostrings R Package)]] | ||
*[[RPR-RegEx|RPR-RegEx (Regular Expressions (regex) with R)]] | *[[RPR-RegEx|RPR-RegEx (Regular Expressions (regex) with R)]] | ||
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| + | {{REVISE}} | ||
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Revision as of 12:39, 16 September 2020
Concepts of Sequence Analysis
(constitution cooncatenation comparison correspondence conservation composition collaboration; Web-services; analysis tools; bioinformatics.ca)
Abstract:
This unit introduces a typology of sequence analysis strategies and presents common access points to sequence analysis tools.
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Objectives:
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Outcomes:
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Deliverables:
Prerequisites:
You need the following preparation before beginning this unit. If you are not familiar with this material from courses you took previously, you need to prepare yourself from other information sources:
- Biomolecules: The molecules of life; nucleic acids and amino acids; the genetic code; protein folding; post-translational modifications and protein biochemistry; membrane proteins; biological function.
This unit builds on material covered in the following prerequisite units:
This page is tagged for revision; expect changes and proceed with caution.
Contents
Task:
- Read the introductory notes on categorizing the approaches to biological sequence analysis.
Self-evaluation
Notes
Further reading, links and resources
If in doubt, ask! If anything about this learning unit is not clear to you, do not proceed blindly but ask for clarification. Post your question on the course mailing list: others are likely to have similar problems. Or send an email to your instructor.
About ...
Author:
- Boris Steipe <boris.steipe@utoronto.ca>
Created:
- 2017-08-05
Modified:
- 2017-11-09
Version:
- 1.0
Version history:
- 1.0 First live
- 0.1 First stub
This copyrighted material is licensed under a Creative Commons Attribution 4.0 International License. Follow the link to learn more.
