Difference between revisions of "User:Boris/Temp/APB"
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===Hardware=== | ===Hardware=== | ||
| − | <table width=" | + | <table width="100%"> |
<tr class="s1"><td class="l1">High performance computing <!-- (... at the bench: GPUs, FPGAs, Clusters) --></td></tr> | <tr class="s1"><td class="l1">High performance computing <!-- (... at the bench: GPUs, FPGAs, Clusters) --></td></tr> | ||
<tr class="s2"><td class="l1">Cloud computing</td></tr> | <tr class="s2"><td class="l1">Cloud computing</td></tr> | ||
| + | <tr><td class="sp"> </td></tr> | ||
</table> | </table> | ||
| − | |||
===Systems and Tools=== | ===Systems and Tools=== | ||
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<tr class="s1"><td class="l1">[[Unix]]</td></tr> | <tr class="s1"><td class="l1">[[Unix]]</td></tr> | ||
<tr class="s2"><td class="l1">[[Network Configuration]]</td></tr> | <tr class="s2"><td class="l1">[[Network Configuration]]</td></tr> | ||
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<tr class="s1"><td class="l1">[[Tools for the bioinformatics lab]]</td></tr> | <tr class="s1"><td class="l1">[[Tools for the bioinformatics lab]]</td></tr> | ||
<tr class="s2"><td class="l1">[[GBrowse|GBrowse and LDAS]]</td></tr> | <tr class="s2"><td class="l1">[[GBrowse|GBrowse and LDAS]]</td></tr> | ||
| + | <tr><td class="sp"> </td></tr> | ||
</table> | </table> | ||
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===Programming=== | ===Programming=== | ||
| − | <table width=" | + | <table width="100%" > |
<tr class="s1"><td class="l1">[[IDE|IDE (Integrated Development Environment)]]</td></tr> | <tr class="s1"><td class="l1">[[IDE|IDE (Integrated Development Environment)]]</td></tr> | ||
<tr class="s2"><td class="l1">[[Regular Expressions]]</td></tr> | <tr class="s2"><td class="l1">[[Regular Expressions]]</td></tr> | ||
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<tr class="s2"><td class="l1">[[Autonomous agents]]</td></tr> | <tr class="s2"><td class="l1">[[Autonomous agents]]</td></tr> | ||
</table> | </table> | ||
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===Algorithms=== | ===Algorithms=== | ||
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<tr class="sh"><td class="l1">Algorithms on Sequences</td></tr> | <tr class="sh"><td class="l1">Algorithms on Sequences</td></tr> | ||
<tr class="s1"><td class="l2">[[Dynamic Programming]]</td></tr> | <tr class="s1"><td class="l2">[[Dynamic Programming]]</td></tr> | ||
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===Communication and collaboration=== | ===Communication and collaboration=== | ||
| − | <table width=" | + | <table width="100%" > |
<tr class="s1"><td class="l1">[[MediaWiki]]</td></tr> | <tr class="s1"><td class="l1">[[MediaWiki]]</td></tr> | ||
<tr class="s2"><td class="l1">[[HTML essentials]]</td></tr> | <tr class="s2"><td class="l1">[[HTML essentials]]</td></tr> | ||
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<tr class="s2"><td class="l1">[[SADI|SADI Semantic Automated Discovery and Integration]]</td></tr> | <tr class="s2"><td class="l1">[[SADI|SADI Semantic Automated Discovery and Integration]]</td></tr> | ||
<tr class="s1"><td class="l1">[[CGI]]</td></tr> | <tr class="s1"><td class="l1">[[CGI]]</td></tr> | ||
| + | <tr><td class="sp"> </td></tr> | ||
</table> | </table> | ||
| − | |||
===Statistics=== | ===Statistics=== | ||
| − | <table width=" | + | <table width="100%" > |
<tr class="s1"><td class="l1">[[Pattern discovery]]</td></tr> | <tr class="s1"><td class="l1">[[Pattern discovery]]</td></tr> | ||
<tr class="s2"><td class="l1">Correlation <!-- (Covariance matrices and their interpretation, application to large problems, collaborative filtering, MIC and MINE) --></td></tr> | <tr class="s2"><td class="l1">Correlation <!-- (Covariance matrices and their interpretation, application to large problems, collaborative filtering, MIC and MINE) --></td></tr> | ||
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<tr class="s1"><td class="l2">R hypothesis testing</td></tr> | <tr class="s1"><td class="l2">R hypothesis testing</td></tr> | ||
<tr class="s2"><td class="l2">[[Bioconductor]]</td></tr> | <tr class="s2"><td class="l2">[[Bioconductor]]</td></tr> | ||
| + | <tr><td class="sp"> </td></tr> | ||
</table> | </table> | ||
===Applications=== | ===Applications=== | ||
| − | <table width=" | + | <table width="100%" > |
<tr class="s1"><td class="l1">[[Data integration]] <!-- Add BioMart: Biodata integration, and data-mining of complex, related, descriptive data --></td></tr> | <tr class="s1"><td class="l1">[[Data integration]] <!-- Add BioMart: Biodata integration, and data-mining of complex, related, descriptive data --></td></tr> | ||
<tr class="s2"><td class="l1">Text mining <!-- (Use cases, tasks and metrics, taggers, vocabulary mapping, Practicals: R-support, Python/Perl support, others...) --></td></tr> | <tr class="s2"><td class="l1">Text mining <!-- (Use cases, tasks and metrics, taggers, vocabulary mapping, Practicals: R-support, Python/Perl support, others...) --></td></tr> | ||
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<tr class="s1"><td class="l1">Functional annotation <!-- GFF --></td></tr> | <tr class="s1"><td class="l1">Functional annotation <!-- GFF --></td></tr> | ||
<tr class="s2"><td class="l1">Microarray analysis <!-- (... in R: differential expression and multiple testing; Loading and normalizing data, calculating differential expression, LOWESS, the question of significance, FWERs: Bonferroni and FDR; SAM and LIMMA) --></td></tr> | <tr class="s2"><td class="l1">Microarray analysis <!-- (... in R: differential expression and multiple testing; Loading and normalizing data, calculating differential expression, LOWESS, the question of significance, FWERs: Bonferroni and FDR; SAM and LIMMA) --></td></tr> | ||
| + | <tr><td class="sp"> </td></tr> | ||
</table> | </table> | ||
</td></tr></table> | </td></tr></table> | ||
</div> | </div> | ||
Revision as of 15:19, 19 September 2012
ContentsHardware
Systems and Tools
Programming
Algorithms
Communication and collaboration
Statistics
Applications
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