Difference between revisions of "Pathway databases"

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==Further reading and resources==
 
==Further reading and resources==
 
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Revision as of 21:11, 29 January 2012

Pathway and Network Databases


This page is a placeholder, or under current development; it is here principally to establish the logical framework of the site. The material on this page is correct, but incomplete.


This page discusses BioPax: the abstraction standard for the interchange of pathway and network information, and on the databases that curate and store biological pathways. Two of the most important databases KEGG and BioCyc have their own pages here.



 

Introductory reading

Ooi et al. (2010) Biomolecular pathway databases. Methods Mol Biol 609:129-44. (pmid: 20221917)

PubMed ] [ DOI ]


 

Contents

 

Standards

Demir et al. (2010) The BioPAX community standard for pathway data sharing. Nat Biotechnol 28:935-42. (pmid: 20829833)

PubMed ] [ DOI ]


 

Databases

Bader et al. (2006) Pathguide: a pathway resource list. Nucleic Acids Res 34:D504-6. (pmid: 16381921)

PubMed ] [ DOI ]


   

Further reading and resources