Difference between revisions of "BIN-FUNC-Annotation"
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Function Annotation | Function Annotation | ||
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| − | + | (Collect function annotation strategies; DAVID and GSEA) | |
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| − | Collect function annotation strategies; DAVID and GSEA | ||
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| − | + | <b>Abstract:</b><br /> | |
<section begin=abstract /> | <section begin=abstract /> | ||
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... | ... | ||
<section end=abstract /> | <section end=abstract /> | ||
| − | + | </div> | |
| − | + | <!-- ============================ --> | |
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| − | + | <table> | |
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| − | <!-- included from "./ | + | <b>Objectives:</b><br /> |
| + | ... | ||
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| + | <b>Outcomes:</b><br /> | ||
| + | ... | ||
| + | </td> | ||
| + | </tr> | ||
| + | </table> | ||
| + | <!-- ============================ --> | ||
| + | <hr> | ||
| + | <b>Deliverables:</b><br /> | ||
| + | <section begin=deliverables /> | ||
| + | <!-- included from "./data/ABC-unit_components.txt", section: "deliverables-time_management" --> | ||
| + | *<b>Time management</b>: Before you begin, estimate how long it will take you to complete this unit. Then, record in your course journal: the number of hours you estimated, the number of hours you worked on the unit, and the amount of time that passed between start and completion of this unit. | ||
| + | <!-- included from "./data/ABC-unit_components.txt", section: "deliverables-journal" --> | ||
| + | *<b>Journal</b>: Document your progress in your [[FND-Journal|Course Journal]]. Some tasks may ask you to include specific items in your journal. Don't overlook these. | ||
| + | <!-- included from "./data/ABC-unit_components.txt", section: "deliverables-insights" --> | ||
| + | *<b>Insights</b>: If you find something particularly noteworthy about this unit, make a note in your [[ABC-Insights|'''insights!''' page]]. | ||
| + | <section end=deliverables /> | ||
| + | <!-- ============================ --> | ||
| + | <hr> | ||
| + | <section begin=prerequisites /> | ||
| + | <b>Prerequisites:</b><br /> | ||
<!-- included from "./data/ABC-unit_components.txt", section: "notes-prerequisites" --> | <!-- included from "./data/ABC-unit_components.txt", section: "notes-prerequisites" --> | ||
| − | + | This unit builds on material covered in the following prerequisite units: | |
*[[BIN-FUNC-Domain_annotation|BIN-FUNC-Domain_annotation (Domain Annotation)]] | *[[BIN-FUNC-Domain_annotation|BIN-FUNC-Domain_annotation (Domain Annotation)]] | ||
*[[BIN-FUNC-Semantic_similarity|BIN-FUNC-Semantic_similarity (Measuring "Semantic Similarity" in Ontologies)]] | *[[BIN-FUNC-Semantic_similarity|BIN-FUNC-Semantic_similarity (Measuring "Semantic Similarity" in Ontologies)]] | ||
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*[[BIN-SEQA-Collaboration|BIN-SEQA-Collaboration (Analysis of Collaborating Sequences)]] | *[[BIN-SEQA-Collaboration|BIN-SEQA-Collaboration (Analysis of Collaborating Sequences)]] | ||
*[[RPR-GEO2R|RPR-GEO2R (GEO2R)]] | *[[RPR-GEO2R|RPR-GEO2R (GEO2R)]] | ||
| + | <section end=prerequisites /> | ||
| + | <!-- ============================ --> | ||
| + | </div> | ||
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== Contents == | == Contents == | ||
<!-- included from "./components/BIN-FUNC-Annotation.components.txt", section: "contents" --> | <!-- included from "./components/BIN-FUNC-Annotation.components.txt", section: "contents" --> | ||
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== Self-evaluation == | == Self-evaluation == | ||
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=== Question 1=== | === Question 1=== | ||
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| − | + | == Notes == | |
| − | {{ | + | <!-- included from "./components/BIN-FUNC-Annotation.components.txt", section: "notes" --> |
| − | + | <!-- included from "./data/ABC-unit_components.txt", section: "notes" --> | |
| − | + | <references /> | |
| + | == Further reading, links and resources == | ||
| + | <!-- {{#pmid: 19957275}} --> | ||
| + | <!-- {{WWW|WWW_GMOD}} --> | ||
| + | <!-- <div class="reference-box">[http://www.ncbi.nlm.nih.gov]</div> --> | ||
{{Vspace}} | {{Vspace}} | ||
Revision as of 19:31, 26 January 2018
Function Annotation
(Collect function annotation strategies; DAVID and GSEA)
Abstract:
...
|
Objectives: |
Outcomes: |
Deliverables:
- Time management: Before you begin, estimate how long it will take you to complete this unit. Then, record in your course journal: the number of hours you estimated, the number of hours you worked on the unit, and the amount of time that passed between start and completion of this unit.
- Journal: Document your progress in your Course Journal. Some tasks may ask you to include specific items in your journal. Don't overlook these.
- Insights: If you find something particularly noteworthy about this unit, make a note in your insights! page.
Prerequisites:
This unit builds on material covered in the following prerequisite units:
- BIN-FUNC-Domain_annotation (Domain Annotation)
- BIN-FUNC-Semantic_similarity (Measuring "Semantic Similarity" in Ontologies)
- BIN-PPI-Analysis (PPI Analysis)
- BIN-SEQA-Comparison (Sequence Analysis: Comparison)
- BIN-SEQA-Composition (Analysis of Sequence Composition)
- BIN-SEQA-Collaboration (Analysis of Collaborating Sequences)
- RPR-GEO2R (GEO2R)
Caution!
This unit is under development. There is some contents here but it is incomplete and/or may change significantly: links may lead to nowhere, the contents is likely going to be rearranged, and objectives, deliverables etc. may be incomplete or missing. Do not work with this material until it is updated to "live" status.
Contents
Task:
- Read the introductory notes on annotating gene sequences with function information.
Self-evaluation
Notes
Further reading, links and resources
If in doubt, ask! If anything about this learning unit is not clear to you, do not proceed blindly but ask for clarification. Post your question on the course mailing list: others are likely to have similar problems. Or send an email to your instructor.
About ...
Author:
- Boris Steipe <boris.steipe@utoronto.ca>
Created:
- 2017-08-05
Modified:
- 2017-08-05
Version:
- 0.1
Version history:
- 0.1 First stub
This copyrighted material is licensed under a Creative Commons Attribution 4.0 International License. Follow the link to learn more.
