Difference between revisions of "WWW GMOD"

From "A B C"
Jump to navigation Jump to search
(Created page with "<div style="display: none"> <section begin=title /> GMOD <small>Generic Model Organism Database project</small> <section end=title /> <section begin=file /> Gmod.org.jpg <se...")
 
m
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
<div style="display: none">
 
<div style="display: none">
  
<section begin=title />
+
<section begin=title />GMOD <small>Generic Model Organism Database project</small><section end=title />
GMOD <small>Generic Model Organism Database project</small>
 
<section end=title />
 
  
<section begin=file />
+
<section begin=file />Gmod.org.jpg<section end=file />
Gmod.org.jpg
 
<section end=file />
 
  
<section begin=url />
+
<section begin=url />http://gmod.org<section end=url />
http://gmod.org
 
<section end=url />
 
  
<section begin=abstract />
+
<section begin=abstract />GMOD (the Generic Model Organism Database project), is a collection of open source software tools for creating and managing genome-scale biological databases. GMOD tools are in use at many large and small community databases, especially for Model Organisms. The include the genome browser GBrowse, the CHADO relational database, the GFF annotation databases, and much more The goal is to free developers of community scale biomolecualr databases from reinventing the wheel. A good overview of resources and principles is available on the [http://gmod.org/wiki/Overview GMOD wiki]. <section end=abstract />
GMOD (the Generic Model Organism Database project), is a collection of open source software tools for creating and managing genome-scale biological databases. GMOD tools are in use at many large and small community databases, especially for Model Organisms. The include the genome browser GBrowse, the CHADO relational database, the GFF annotation databases, and much more The goal is to free developers of community scale biomolecualr databases from reinventing the wheel. A good overview of resources and principles is available on the [http://gmod.org/wiki/Overview GMOD wiki].  
 
<section end=abstract />
 
  
<section begin=reference />
+
<section begin=reference />{{WWW_resource_reference_section|18570664}}<section end=reference />
{{WWW_resource_reference_section|pmid=18570664}}
 
<section end=reference />
 
  
 
<!-- DONT EDIT BELOW -->
 
<!-- DONT EDIT BELOW -->

Latest revision as of 17:02, 28 January 2012

GMOD Generic Model Organism Database project

Gmod.org.jpg

http://gmod.org

GMOD (the Generic Model Organism Database project), is a collection of open source software tools for creating and managing genome-scale biological databases. GMOD tools are in use at many large and small community databases, especially for Model Organisms. The include the genome browser GBrowse, the CHADO relational database, the GFF annotation databases, and much more The goal is to free developers of community scale biomolecualr databases from reinventing the wheel. A good overview of resources and principles is available on the GMOD wiki.

===Reference===

O'Connor et al. (2008) GMODWeb: a web framework for the Generic Model Organism Database. Genome Biol 9:R102. (pmid: 18570664)

PubMed ] [ DOI ] The Generic Model Organism Database (GMOD) initiative provides species-agnostic data models and software tools for representing curated model organism data. Here we describe GMODWeb, a GMOD project designed to speed the development of model organism database (MOD) websites. Sites created with GMODWeb provide integration with other GMOD tools and allow users to browse and search through a variety of data types. GMODWeb was built using the open source Turnkey web framework and is available from http://turnkey.sourceforge.net.



 





GMOD Generic Model Organism Database project

GMOD Generic Model Organism Database project



URL

http://gmod.org


Abstract

GMOD (the Generic Model Organism Database project), is a collection of open source software tools for creating and managing genome-scale biological databases. GMOD tools are in use at many large and small community databases, especially for Model Organisms. The include the genome browser GBrowse, the CHADO relational database, the GFF annotation databases, and much more The goal is to free developers of community scale biomolecualr databases from reinventing the wheel. A good overview of resources and principles is available on the GMOD wiki.


Reference

O'Connor et al. (2008) GMODWeb: a web framework for the Generic Model Organism Database. Genome Biol 9:R102. (pmid: 18570664)

PubMed ] [ DOI ] The Generic Model Organism Database (GMOD) initiative provides species-agnostic data models and software tools for representing curated model organism data. Here we describe GMODWeb, a GMOD project designed to speed the development of model organism database (MOD) websites. Sites created with GMODWeb provide integration with other GMOD tools and allow users to browse and search through a variety of data types. GMODWeb was built using the open source Turnkey web framework and is available from http://turnkey.sourceforge.net.