Difference between revisions of "BIN-PPI-Concepts"
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<div id="BIO"> | <div id="BIO"> | ||
<div class="b1"> | <div class="b1"> | ||
| − | + | Protein-Protein Interaction (PPI) Concepts | |
</div> | </div> | ||
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<div class="keywords"> | <div class="keywords"> | ||
<b>Keywords:</b> | <b>Keywords:</b> | ||
| − | Detecting PPIs | + | Detecting PPIs; the relationship abstraction; complexes, binary and n-ary interactions |
</div> | </div> | ||
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| − | {{ | + | {{DEV}} |
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<div id="ABC-unit-framework"> | <div id="ABC-unit-framework"> | ||
== Abstract == | == Abstract == | ||
| − | <!-- included from "../components/ | + | <!-- included from "../components/BIN-PPI-Concepts.components.wtxt", section: "abstract" --> |
... | ... | ||
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== This unit ... == | == This unit ... == | ||
=== Prerequisites === | === Prerequisites === | ||
| − | <!-- included from "../components/ | + | <!-- included from "../components/BIN-PPI-Concepts.components.wtxt", section: "prerequisites" --> |
<!-- included from "ABC-unit_components.wtxt", section: "notes-external_prerequisites" --> | <!-- included from "ABC-unit_components.wtxt", section: "notes-external_prerequisites" --> | ||
You need the following preparation before beginning this unit. If you are not familiar with this material from courses you took previously, you need to prepare yourself from other information sources: | You need the following preparation before beginning this unit. If you are not familiar with this material from courses you took previously, you need to prepare yourself from other information sources: | ||
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<!-- included from "ABC-unit_components.wtxt", section: "notes-prerequisites" --> | <!-- included from "ABC-unit_components.wtxt", section: "notes-prerequisites" --> | ||
You need to complete the following units before beginning this one: | You need to complete the following units before beginning this one: | ||
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*[[BIN-SYS-Concepts]] | *[[BIN-SYS-Concepts]] | ||
| − | *[[FND-MAT- | + | *[[FND-MAT-Graphs_and_networks]] |
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=== Objectives === | === Objectives === | ||
| − | <!-- included from "../components/ | + | <!-- included from "../components/BIN-PPI-Concepts.components.wtxt", section: "objectives" --> |
... | ... | ||
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=== Outcomes === | === Outcomes === | ||
| − | <!-- included from "../components/ | + | <!-- included from "../components/BIN-PPI-Concepts.components.wtxt", section: "outcomes" --> |
... | ... | ||
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=== Deliverables === | === Deliverables === | ||
| − | <!-- included from "../components/ | + | <!-- included from "../components/BIN-PPI-Concepts.components.wtxt", section: "deliverables" --> |
<!-- included from "ABC-unit_components.wtxt", section: "deliverables-time_management" --> | <!-- included from "ABC-unit_components.wtxt", section: "deliverables-time_management" --> | ||
*<b>Time management</b>: Before you begin, estimate how long it will take you to complete this unit. Then, record in your course journal: the number of hours you estimated, the number of hours you worked on the unit, and the amount of time that passed between start and completion of this unit. | *<b>Time management</b>: Before you begin, estimate how long it will take you to complete this unit. Then, record in your course journal: the number of hours you estimated, the number of hours you worked on the unit, and the amount of time that passed between start and completion of this unit. | ||
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=== Evaluation === | === Evaluation === | ||
| − | <!-- included from "../components/ | + | <!-- included from "../components/BIN-PPI-Concepts.components.wtxt", section: "evaluation" --> |
<!-- included from "ABC-unit_components.wtxt", section: "eval-none" --> | <!-- included from "ABC-unit_components.wtxt", section: "eval-none" --> | ||
<b>Evaluation: NA</b><br /> | <b>Evaluation: NA</b><br /> | ||
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<div id="BIO"> | <div id="BIO"> | ||
== Contents == | == Contents == | ||
| − | <!-- included from "../components/ | + | <!-- included from "../components/BIN-PPI-Concepts.components.wtxt", section: "contents" --> |
| − | . | + | {{Task|1= |
| + | *Read the introductory notes on {{ABC-PDF|BIN-PPI-Concepts|the concepts behind the measurement and analysis of protein-protein interactions}}. | ||
| + | }} | ||
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== Notes == | == Notes == | ||
| − | <!-- included from "../components/ | + | <!-- included from "../components/BIN-PPI-Concepts.components.wtxt", section: "notes" --> |
<!-- included from "ABC-unit_components.wtxt", section: "notes" --> | <!-- included from "ABC-unit_components.wtxt", section: "notes" --> | ||
<references /> | <references /> | ||
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<div id="ABC-unit-framework"> | <div id="ABC-unit-framework"> | ||
== Self-evaluation == | == Self-evaluation == | ||
| − | <!-- included from "../components/ | + | <!-- included from "../components/BIN-PPI-Concepts.components.wtxt", section: "self-evaluation" --> |
<!-- | <!-- | ||
=== Question 1=== | === Question 1=== | ||
Revision as of 04:31, 31 August 2017
Protein-Protein Interaction (PPI) Concepts
Keywords: Detecting PPIs; the relationship abstraction; complexes, binary and n-ary interactions
Contents
Caution!
This unit is under development. There is some contents here but it is incomplete and/or may change significantly: links may lead to nowhere, the contents is likely going to be rearranged, and objectives, deliverables etc. may be incomplete or missing. Do not work with this material until it is updated to "live" status.
Abstract
...
This unit ...
Prerequisites
You need the following preparation before beginning this unit. If you are not familiar with this material from courses you took previously, you need to prepare yourself from other information sources:
- Biomolecules: The molecules of life; nucleic acids and amino acids; the genetic code; protein folding; post-translational modifications and protein biochemistry; membrane proteins; biological function.
- Metabolism: Enzymatic catalysis and control; reaction sequences and pathways; chemiosmotic coupling; catabolic- and anabolic pathways.
- Organelles: Compartmentalization, organelles and structures of the cell; the extracellular matrix.
- The Central Dogma: Regulation of transcription and translation; protein biosynthesis and degradation; quality control.
You need to complete the following units before beginning this one:
Objectives
...
Outcomes
...
Deliverables
- Time management: Before you begin, estimate how long it will take you to complete this unit. Then, record in your course journal: the number of hours you estimated, the number of hours you worked on the unit, and the amount of time that passed between start and completion of this unit.
- Journal: Document your progress in your course journal.
- Insights: If you find something particularly noteworthy about this unit, make a note in your insights! page.
Evaluation
Evaluation: NA
- This unit is not evaluated for course marks.
Contents
Task:
- Read the introductory notes on the concepts behind the measurement and analysis of protein-protein interactions.
Further reading, links and resources
Notes
Self-evaluation
If in doubt, ask! If anything about this learning unit is not clear to you, do not proceed blindly but ask for clarification. Post your question on the course mailing list: others are likely to have similar problems. Or send an email to your instructor.
About ...
Author:
- Boris Steipe <boris.steipe@utoronto.ca>
Created:
- 2017-08-05
Modified:
- 2017-08-05
Version:
- 0.1
Version history:
- 0.1 First stub
This copyrighted material is licensed under a Creative Commons Attribution 4.0 International License. Follow the link to learn more.
