Difference between revisions of "ABC-INT-Genome annotation"

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<b>Keywords:</b>&nbsp;
 
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Integration unit: annotate sequences in a genome
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Integrator unit: annotate sequences in a genome
 
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You need to complete the following units before beginning this one:
 
You need to complete the following units before beginning this one:
*[[BIN-FUNC-Annotation]]
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*[[BIN-FUNC-Annotation|BIN-FUNC-Annotation (Function Annotation)]]
*[[BIN-Genome-Browsers]]
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*[[BIN-Genome-Browsers|BIN-Genome-Browsers (Genome Browsers)]]
  
 
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Revision as of 19:11, 2 November 2017

Integration Unit: Genome annotation


 

Keywords:  Integrator unit: annotate sequences in a genome


 



 


Sorry!

This page is only a stub; it is here as a placeholder to establish the logical framework of the site but there is no significant content as yet. Do not work with this material until it is updated to "live" status.


 


Abstract

This page assesses the learning units for data management and sequence analysis of genomic sequence data.

  • choose a fungal genome
  • create a datamodel for domain annotations
  • implement as a dataframe
  • annotate signal sequence (or disordered stretches)
  • plot and analyze results


 


This unit ...

Prerequisites

You need to complete the following units before beginning this one:


 


Objectives

...


 


Outcomes

...


 


Deliverables

  • No separate deliverables: This unit collects other units and has no deliverables on its own.


 


Evaluation

Evaluation: Integrated Unit

This unit should be submitted for evaluation for a maximum of 10 marks. Details TBD.


 


Contents

This is a "milestone unit". Its purpose is merely to collect a number of preparatory units into a single, common prerequisite. It has no contents of its own; you are expected to be familiar and competent with all preparatory material at this point.


 


Further reading, links and resources

 


Notes


 


Self-evaluation

 



 




 

If in doubt, ask! If anything about this learning unit is not clear to you, do not proceed blindly but ask for clarification. Post your question on the course mailing list: others are likely to have similar problems. Or send an email to your instructor.



 

About ...
 
Author:

Boris Steipe <boris.steipe@utoronto.ca>

Created:

2017-08-05

Modified:

2017-08-09

Version:

0.1

Version history:

  • 0.1 First stub

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