Difference between revisions of "Workshops/Saskatoon 2015-Exploratory Data Analysis"
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*[[Media:R_refcard-data-mining.pdf|A concise reference card of '''R''' functions for data mining (pdf)]] | *[[Media:R_refcard-data-mining.pdf|A concise reference card of '''R''' functions for data mining (pdf)]] | ||
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| + | *[https://support.rstudio.com/hc/en-us/articles/200526207-Using-Projects '''Using Projects with R Studio'''] | ||
| + | *[http://software-carpentry.org/ '''Software Carpentry'''] | ||
| + | **[http://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.1001745 Best Practices for Scientific Computing, Wilson ''et al.'', PLoS Biology, Jan. 2014] | ||
| + | *[https://support.rstudio.com/hc/en-us/articles/200532077-Version-Control-with-Git-and-SVN '''Version control in R Studio'''] | ||
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* The '''R''' help mailing list: https://stat.ethz.ch/mailman/listinfo/r-help | * The '''R''' help mailing list: https://stat.ethz.ch/mailman/listinfo/r-help | ||
* '''Rseek''': the specialized search engine for '''R''' topics: http://rseek.org/ | * '''Rseek''': the specialized search engine for '''R''' topics: http://rseek.org/ | ||
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* The '''CRAN''' task-view collection: http://cran.r-project.org/web/views/ | * The '''CRAN''' task-view collection: http://cran.r-project.org/web/views/ | ||
* '''Bioconductor''' task views: http://www.bioconductor.org/packages/release/BiocViews.html | * '''Bioconductor''' task views: http://www.bioconductor.org/packages/release/BiocViews.html | ||
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| + | *[[Media:Weissgerber_(2015)_BeyondBarcharts.pdf|Weissgerber_(2015)_BeyondBarcharts.pdf]] | ||
Revision as of 13:22, 19 August 2015
Introduction to Exploratory Data Analysis with R
Contents
Schedule
Please note: this schedule is a rough guideline only, we will be very flexible to adapt to class needs as we proceed.
| Time | Thursday's Activities | Friday |
| 09:00 – 10:30 | Lecture and practicals: EDA | Lecture and practicals: Dimension reduction |
| 10:30 – 11:00 | Coffee break | |
| 11:00 – 12:30 | Lecture and practicals: EDA | Lecture and practicals: Clustering |
| 12:30 – 13:30 | Lunch break | |
| 13:30 – 15:00 | Lecture and practicals: Software development | Lecture and practicals:Clustering |
| 15:00 – 15:30 | Coffee break | |
| 13:30 – 15:00 | Lecture and practicals: Regression | Lecture and practicals: Hypothesis testing |
General Resources
EDA
- Slides
- Scripts
- Resources
Software
- Slides
- Scripts
- Resources
Regression
- Slides
- Scripts
- Resources
Dimension Reduction
- Slides
- Scripts
- Resources
Clustering
- Slides
- Scripts
- Resources
Hypothesis Testing
- Slides
- Scripts
- Resources
Generally useful links
- Help and Information
- The R help mailing list: https://stat.ethz.ch/mailman/listinfo/r-help
- Rseek: the specialized search engine for R topics: http://rseek.org/
- R questions on stackoverflow: http://stackoverflow.com/questions/tagged/r
- The Comprehensive R Archive Network CRAN: http://cran.r-project.org/
- The CRAN task-view collection: http://cran.r-project.org/web/views/
- Bioconductor task views: http://www.bioconductor.org/packages/release/BiocViews.html
- Resources
Notes
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