Difference between revisions of "BIN-PHYLO-Selective pressure"

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<div style="padding:5px; border:1px solid #000000; background-color:#f2fafa; font-size:300%; font-weight:400; color: #000000; width:100%;">
 
Detecting Purifying Selection Through Phylogenetic Analysis
 
Detecting Purifying Selection Through Phylogenetic Analysis
  </div>
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<div style="padding:5px; margin-top:20px; margin-bottom:10px; background-color:#f2fafa; font-size:30%; font-weight:200; color: #000000; ">
 
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(Purifying selection; recent selection; analysis of phylogenetic trees)
  {{Vspace}}
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</div>
 
 
<div class="keywords">
 
<b>Keywords:</b>&nbsp;
 
Purifying selection; recent selection; analysis of phylogenetic trees
 
 
</div>
 
</div>
  
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{{Smallvspace}}
 
 
  
__TOC__
 
  
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<div style="padding:5px; border:1px solid #000000; background-color:#f2fafa33; font-size:85%;">
 
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<div style="font-size:118%;">
 
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<b>Abstract:</b><br />
{{STUB}}
 
 
 
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</div>
 
<div id="ABC-unit-framework">
 
== Abstract ==
 
 
<section begin=abstract />
 
<section begin=abstract />
<!-- included from "./components/BIN-PHYLO-Selective_pressure.components.txt", section: "abstract" -->
 
 
...
 
...
 
<section end=abstract />
 
<section end=abstract />
 
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</div>
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<!-- ============================ -->
 
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<hr>
 
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<table>
== This unit ... ==
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<tr>
=== Prerequisites ===
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<td style="padding:10px;">
<!-- included from "./components/BIN-PHYLO-Selective_pressure.components.txt", section: "prerequisites" -->
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<b>Objectives:</b><br />
<!-- included from "./data/ABC-unit_components.txt", section: "notes-prerequisites" -->
 
You need to complete the following units before beginning this one:
 
*[[BIN-PHYLO-Tree_analysis|BIN-PHYLO-Tree_analysis (Analysing Phylogenetic Trees)]]
 
 
 
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=== Objectives ===
 
<!-- included from "./components/BIN-PHYLO-Selective_pressure.components.txt", section: "objectives" -->
 
 
This unit will ...
 
This unit will ...
 
* ... introduce ;
 
* ... introduce ;
 
* ... demonstrate ;
 
* ... demonstrate ;
 
* ... teach ;
 
* ... teach ;
 
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</td>
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<td style="padding:10px;">
 
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<b>Outcomes:</b><br />
 
 
=== Outcomes ===
 
<!-- included from "./components/BIN-PHYLO-Selective_pressure.components.txt", section: "outcomes" -->
 
 
After working through this unit you ...
 
After working through this unit you ...
 
* ... can ;
 
* ... can ;
 
* ... are familar with ;
 
* ... are familar with ;
 
* ... have begun to.
 
* ... have begun to.
 
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</td>
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</tr>
 
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</table>
 
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<!-- ============================ -->
=== Deliverables ===
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<hr>
<!-- included from "./components/BIN-PHYLO-Selective_pressure.components.txt", section: "deliverables" -->
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<b>Deliverables:</b><br />
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<section begin=deliverables />
 
<!-- included from "./data/ABC-unit_components.txt", section: "deliverables-time_management" -->
 
<!-- included from "./data/ABC-unit_components.txt", section: "deliverables-time_management" -->
 
*<b>Time management</b>: Before you begin, estimate how long it will take you to complete this unit. Then, record in your course journal: the number of hours you estimated, the number of hours you worked on the unit, and the amount of time that passed between start and completion of this unit.
 
*<b>Time management</b>: Before you begin, estimate how long it will take you to complete this unit. Then, record in your course journal: the number of hours you estimated, the number of hours you worked on the unit, and the amount of time that passed between start and completion of this unit.
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<!-- included from "./data/ABC-unit_components.txt", section: "deliverables-insights" -->
 
<!-- included from "./data/ABC-unit_components.txt", section: "deliverables-insights" -->
 
*<b>Insights</b>: If you find something particularly noteworthy about this unit, make a note in your [[ABC-Insights|'''insights!''' page]].
 
*<b>Insights</b>: If you find something particularly noteworthy about this unit, make a note in your [[ABC-Insights|'''insights!''' page]].
 
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<section end=deliverables />
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<!-- ============================  -->
 
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<hr>
 
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<section begin=prerequisites />
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<b>Prerequisites:</b><br />
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<!-- included from "./data/ABC-unit_components.txt", section: "notes-prerequisites" -->
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This unit builds on material covered in the following prerequisite units:
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*[[BIN-PHYLO-Tree_analysis|BIN-PHYLO-Tree_analysis (Analysing Phylogenetic Trees)]]
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<section end=prerequisites />
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<!-- ============================  -->
 
</div>
 
</div>
<div id="BIO">
 
== Contents ==
 
<!-- included from "./components/BIN-PHYLO-Selective_pressure.components.txt", section: "contents" -->
 
  
{{Task|1=
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{{Smallvspace}}
*Read the introductory notes on {{ABC-PDF|BIN-PHYLO-Selective_pressure|detecting the traces of selective pressure through phylogenetic analysis}}.
 
}}
 
  
  
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{{STUB}}
  
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{{Smallvspace}}
  
  
== Further reading, links and resources ==
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__TOC__
<!-- {{#pmid: 19957275}} -->
 
<!-- {{WWW|WWW_GMOD}} -->
 
<!-- <div class="reference-box">[http://www.ncbi.nlm.nih.gov]</div> -->
 
  
 
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{{Vspace}}
  
  
== Notes ==
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== Contents ==
<!-- included from "./components/BIN-PHYLO-Selective_pressure.components.txt", section: "notes" -->
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<!-- included from "./components/BIN-PHYLO-Selective_pressure.components.txt", section: "contents" -->
<!-- included from "./data/ABC-unit_components.txt", section: "notes" -->
 
<references />
 
  
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{{Task|1=
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*Read the introductory notes on {{ABC-PDF|BIN-PHYLO-Selective_pressure|detecting the traces of selective pressure through phylogenetic analysis}}.
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}}
  
  
</div>
 
<div id="ABC-unit-framework">
 
 
== Self-evaluation ==
 
== Self-evaluation ==
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=== Question 1===
 
=== Question 1===
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-->
 
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== Notes ==
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<!-- included from "./data/ABC-unit_components.txt", section: "notes" -->
 
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<references />
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== Further reading, links and resources ==
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<!-- {{#pmid: 19957275}} -->
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<!-- {{WWW|WWW_GMOD}} -->
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<!-- <div class="reference-box">[http://www.ncbi.nlm.nih.gov]</div> -->
  
 
{{Vspace}}
 
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Revision as of 19:32, 26 January 2018

Detecting Purifying Selection Through Phylogenetic Analysis

(Purifying selection; recent selection; analysis of phylogenetic trees)


 


Abstract:

...


Objectives:
This unit will ...

  • ... introduce ;
  • ... demonstrate ;
  • ... teach ;

Outcomes:
After working through this unit you ...

  • ... can ;
  • ... are familar with ;
  • ... have begun to.

Deliverables:

  • Time management: Before you begin, estimate how long it will take you to complete this unit. Then, record in your course journal: the number of hours you estimated, the number of hours you worked on the unit, and the amount of time that passed between start and completion of this unit.
  • Journal: Document your progress in your Course Journal. Some tasks may ask you to include specific items in your journal. Don't overlook these.
  • Insights: If you find something particularly noteworthy about this unit, make a note in your insights! page.

Prerequisites:
This unit builds on material covered in the following prerequisite units:


 


Sorry!

This page is only a stub; it is here as a placeholder to establish the logical framework of the site but there is no significant content as yet. Do not work with this material until it is updated to "live" status.


 



 


Contents


Self-evaluation

Notes

Further reading, links and resources

 




 

If in doubt, ask! If anything about this learning unit is not clear to you, do not proceed blindly but ask for clarification. Post your question on the course mailing list: others are likely to have similar problems. Or send an email to your instructor.



 

About ...
 
Author:

Boris Steipe <boris.steipe@utoronto.ca>

Created:

2017-08-05

Modified:

2017-10-31

Version:

1.0

Version history:

  • 1.0 First live version.
  • 0.1 First stub

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