Difference between revisions of "User:Boris/Temp/APB"

From "A B C"
Jump to navigation Jump to search
m
Line 13: Line 13:
 
<td>'''Week'''</td>
 
<td>'''Week'''</td>
 
<td>'''Date'''</td>
 
<td>'''Date'''</td>
−
<td>'''Lecturer'''</td>
 
 
<td>'''Contents'''</td>
 
<td>'''Contents'''</td>
 
<td>'''Activities'''</td>
 
<td>'''Activities'''</td>
 +
<td>'''Assignment'''</td>
 
</tr>
 
</tr>
  
Line 21: Line 21:
 
<td>1</td>
 
<td>1</td>
 
<td>Jan. 9 - 14</td>
 
<td>Jan. 9 - 14</td>
−
<td>Steipe</td>
 
 
<td>
 
<td>
 
* [[CSB_Introduction|Introduction to Computational Systems Biology]]
 
* [[CSB_Introduction|Introduction to Computational Systems Biology]]
Line 27: Line 26:
 
</td>
 
</td>
 
<td>&mdash;</td>
 
<td>&mdash;</td>
 +
<td>[[CSB_Assignment_Week_1]]</td>
 
</tr>
 
</tr>
  
Line 37: Line 37:
 
<td>'''Week'''</td>
 
<td>'''Week'''</td>
 
<td>'''Date'''</td>
 
<td>'''Date'''</td>
−
<td>'''Lecturer'''</td>
 
 
<td>'''Contents'''</td>
 
<td>'''Contents'''</td>
 
<td>'''Activities'''</td>
 
<td>'''Activities'''</td>
 +
<td>'''Assignment'''</td>
 
</tr>
 
</tr>
 
<!-- ===================    /TOPIC  ===================  -->
 
<!-- ===================    /TOPIC  ===================  -->
Line 46: Line 46:
 
<td>2</td>
 
<td>2</td>
 
<td>Jan. 16 - 21</td>
 
<td>Jan. 16 - 21</td>
−
<td>Steipe</td>
 
 
<td>
 
<td>
 
* [[CSB_Web_tools|CSB on the Web: Databases and services]]
 
* [[CSB_Web_tools|CSB on the Web: Databases and services]]
Line 55: Line 54:
 
</td>
 
</td>
 
<td>Quiz 1</td>
 
<td>Quiz 1</td>
 +
<td>[[CSB_Assignment_Week_2]]</td>
 
</tr>
 
</tr>
  
Line 66: Line 66:
 
<td>'''Week'''</td>
 
<td>'''Week'''</td>
 
<td>'''Date'''</td>
 
<td>'''Date'''</td>
−
<td>'''Lecturer'''</td>
 
 
<td>'''Contents'''</td>
 
<td>'''Contents'''</td>
 
<td>'''Activities'''</td>
 
<td>'''Activities'''</td>
 +
<td>'''Assignment'''</td>
 
</tr>
 
</tr>
 
<!-- ===================    /TOPIC  ===================  -->
 
<!-- ===================    /TOPIC  ===================  -->
Line 75: Line 75:
 
<td>3</td>
 
<td>3</td>
 
<td>Jan. 23 - 28</td>
 
<td>Jan. 23 - 28</td>
−
<td>Steipe</td>
 
 
<td>
 
<td>
 
* Working with -ome scale data
 
* Working with -ome scale data
Line 85: Line 84:
 
</td>
 
</td>
 
<td>Quiz 2, project concept due</td>
 
<td>Quiz 2, project concept due</td>
 +
<td>[[CSB_Assignment_Week_3]]</td>
 
</tr>
 
</tr>
  
Line 90: Line 90:
 
<td>4</td>
 
<td>4</td>
 
<td>Jan. 30 - Feb. 3</td>
 
<td>Jan. 30 - Feb. 3</td>
−
<td>Steipe</td>
 
 
<td>
 
<td>
 
* [[Genomics|Genomics]]
 
* [[Genomics|Genomics]]
Line 96: Line 95:
 
</td>
 
</td>
 
<td>Quiz 3</td>
 
<td>Quiz 3</td>
 +
<td>[[CSB_Assignment_Week_4]]</td>
 
</tr>
 
</tr>
  
Line 101: Line 101:
 
<td>5</td>
 
<td>5</td>
 
<td>Feb. 6 - 10</td>
 
<td>Feb. 6 - 10</td>
−
<td>Steipe</td>
 
 
<td>
 
<td>
 
*  [[Proteome|Proteome]]
 
*  [[Proteome|Proteome]]
Line 110: Line 109:
 
</td>
 
</td>
 
<td>Quiz 4, project outline due</td>
 
<td>Quiz 4, project outline due</td>
 +
<td>[[CSB_Assignment_Week_5]]</td>
 
</tr>
 
</tr>
  
Line 121: Line 121:
 
<td>'''Week'''</td>
 
<td>'''Week'''</td>
 
<td>'''Date'''</td>
 
<td>'''Date'''</td>
−
<td>'''Lecturer'''</td>
 
 
<td>'''Contents'''</td>
 
<td>'''Contents'''</td>
 
<td>'''Activities'''</td>
 
<td>'''Activities'''</td>
 +
<td>'''Assignment'''</td>
 
</tr>
 
</tr>
 
<!-- ===================    /TOPIC  ===================  -->
 
<!-- ===================    /TOPIC  ===================  -->
Line 130: Line 130:
 
<td>6</td>
 
<td>6</td>
 
<td>Feb. 13 - 17</td>
 
<td>Feb. 13 - 17</td>
−
<td>Steipe</td>
 
 
<td>
 
<td>
 
* [[Cytoscape|Cytoscape]]
 
* [[Cytoscape|Cytoscape]]
Line 136: Line 135:
 
</td>
 
</td>
 
<td>Quiz 5</td>
 
<td>Quiz 5</td>
 +
<td>[[CSB_Assignment_Week_6]]</td>
 
</tr>
 
</tr>
  
Line 147: Line 147:
 
<td>7</td>
 
<td>7</td>
 
<td>Feb. 27 - Mar. 2</td>
 
<td>Feb. 27 - Mar. 2</td>
−
<td>Steipe</td>
 
 
<td>
 
<td>
 
* [[PPI|The biology of protein-protein interactions]]; physical vs. genetic interactions
 
* [[PPI|The biology of protein-protein interactions]]; physical vs. genetic interactions
Line 154: Line 153:
 
</td>
 
</td>
 
<td>Quiz 6</td>
 
<td>Quiz 6</td>
 +
<td>[[CSB_Assignment_Week_7]]</td>
 
</tr>
 
</tr>
  
Line 165: Line 165:
 
<td>'''Week'''</td>
 
<td>'''Week'''</td>
 
<td>'''Date'''</td>
 
<td>'''Date'''</td>
−
<td>'''Lecturer'''</td>
 
 
<td>'''Contents'''</td>
 
<td>'''Contents'''</td>
 
<td>'''Activities'''</td>
 
<td>'''Activities'''</td>
 +
<td>'''Assignment'''</td>
 
</tr>
 
</tr>
 
<!-- ===================    /TOPIC  ===================  -->
 
<!-- ===================    /TOPIC  ===================  -->
Line 174: Line 174:
 
<td>8</td>
 
<td>8</td>
 
<td>Mar. 5 - 9</td>
 
<td>Mar. 5 - 9</td>
−
<td>Steipe</td>
 
 
<td>
 
<td>
 
* [[Gene_regulatory_networks|Gene regulatory networks]]
 
* [[Gene_regulatory_networks|Gene regulatory networks]]
Line 182: Line 181:
 
</td>
 
</td>
 
<td>Quiz 7</td>
 
<td>Quiz 7</td>
 +
<td>[[CSB_Assignment_Week_8]]</td>
 
</tr>
 
</tr>
  
Line 187: Line 187:
 
<td>9</td>
 
<td>9</td>
 
<td>Mar. 12 - 16</td>
 
<td>Mar. 12 - 16</td>
−
<td>Steipe</td>
 
 
<td>
 
<td>
 
* [[CSB_Regulatory_network_extraction|Extracting regulatory networks from gene expression data]]
 
* [[CSB_Regulatory_network_extraction|Extracting regulatory networks from gene expression data]]
Line 193: Line 192:
 
</td>
 
</td>
 
<td>Quiz 8</td>
 
<td>Quiz 8</td>
 +
<td>[[CSB_Assignment_Week_9]]</td>
 
</tr>
 
</tr>
  
Line 198: Line 198:
 
<td>10</td>
 
<td>10</td>
 
<td>Mar. 19 - 23</td>
 
<td>Mar. 19 - 23</td>
−
<td>Steipe</td>
 
 
<td>
 
<td>
 
* [[CSB_Structural_network_analysis|Structural network analysis]] http://www.csb.ethz.ch/research/structural
 
* [[CSB_Structural_network_analysis|Structural network analysis]] http://www.csb.ethz.ch/research/structural
Line 204: Line 203:
 
</td>
 
</td>
 
<td>Quiz 9, project final submission due</td>
 
<td>Quiz 9, project final submission due</td>
 +
<td>[[CSB_Assignment_Week_10]]</td>
 
</tr>
 
</tr>
  
Line 215: Line 215:
 
<td>'''Week'''</td>
 
<td>'''Week'''</td>
 
<td>'''Date'''</td>
 
<td>'''Date'''</td>
−
<td>'''Lecturer'''</td>
 
 
<td>'''Contents'''</td>
 
<td>'''Contents'''</td>
 
<td>'''Activities'''</td>
 
<td>'''Activities'''</td>
 +
<td>'''Assignment'''</td>
 
</tr>
 
</tr>
 
<!-- ===================    /TOPIC  ===================  -->
 
<!-- ===================    /TOPIC  ===================  -->
Line 224: Line 224:
 
<td>11</td>
 
<td>11</td>
 
<td>Mar. 26 - 30</td>
 
<td>Mar. 26 - 30</td>
−
<td>Steipe</td>
 
 
<td>
 
<td>
 
* [[CSB_modelling methods|Modelling methods]]:
 
* [[CSB_modelling methods|Modelling methods]]:
Line 235: Line 234:
 
</td>
 
</td>
 
<td>&mdash;</td>
 
<td>&mdash;</td>
 +
<td>[[CSB_Assignment_Week_11]]</td>
 
</tr>
 
</tr>
  
Line 240: Line 240:
 
<td>12</td>
 
<td>12</td>
 
<td>Apr. 2 - 6</td>
 
<td>Apr. 2 - 6</td>
−
<td>Steipe</td>
 
 
<td>
 
<td>
 
* [[Constraint based modelling]], [[Flux balance analysis]]
 
* [[Constraint based modelling]], [[Flux balance analysis]]
Line 246: Line 245:
 
</td>
 
</td>
 
<td>&mdash;</td>
 
<td>&mdash;</td>
 +
<td>[[CSB_Assignment_Week_12]]</td>
 
</tr>
 
</tr>
  

Revision as of 12:14, 9 January 2012

Timetable and syllabus

I n t r o d u c t i o n
Week Date Contents Activities Assignment
1 Jan. 9 - 14 — CSB_Assignment_Week_1
 
F u n c t i o n a l   A n n o t a t i o n
Week Date Contents Activities Assignment
2 Jan. 16 - 21 Quiz 1 CSB_Assignment_Week_2
 
"-omics"
Week Date Contents Activities Assignment
3 Jan. 23 - 28 Quiz 2, project concept due CSB_Assignment_Week_3
4 Jan. 30 - Feb. 3 Quiz 3 CSB_Assignment_Week_4
5 Feb. 6 - 10 Quiz 4, project outline due CSB_Assignment_Week_5
 
I n t e r a c t i o n s ,   P a t h w a y s   a n d   N e t w o r k s
Week Date Contents Activities Assignment
6 Feb. 13 - 17
  • Cytoscape
  • Graph theory, graph types and metrics; small-world or random-geometric, date-hubs and party-hubs
 Quiz 5 CSB_Assignment_Week_6
  Feb. 20 - 24 Reading Week - School closed
7 Feb. 27 - Mar. 2 Quiz 6 CSB_Assignment_Week_7
 
S y s t e m s
Week Date Contents Activities Assignment
8 Mar. 5 - 9 Quiz 7 CSB_Assignment_Week_8
9 Mar. 12 - 16 Quiz 8 CSB_Assignment_Week_9
10 Mar. 19 - 23 Quiz 9, project final submission due CSB_Assignment_Week_10
 
M o d e l s
Week Date Contents Activities Assignment
11 Mar. 26 - 30 — CSB_Assignment_Week_11
12 Apr. 2 - 6 — CSB_Assignment_Week_12


Retrieved from "http://steipe.biochemistry.utoronto.ca/abc/index.php?title=User:Boris/Temp/APB&oldid=4557"