Difference between revisions of "Lecture 19"

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<small>[[Lecture_20|(Previous lecture)]] ... [[Lecture_22|(Next lecture)]]</small>  
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<small>[[Lecture_18|(Previous lecture)]] ... [[Lecture_20|(Next lecture)]]</small>  
  
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==Microarray Analysis==
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==Comparative Genomics==
  
 
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* Summary points
 
* Summary points
 
* Exercises
 
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* Further reading
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* Further reading -->
  
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(Some of the slides in this lecture are based on material delivered by John Quackenbush at the February 2006 [http://www.bioinformatics.ca '''CBW workshop'''] in Toronto.)
 
  
 
==Lecture Slides==
 
==Lecture Slides==
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[[Image:L21_s001.jpg|frame|none|Lecture 21, Slide 001<br>
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[[Image:L19_s001.jpg|frame|none|Lecture 19, Slide 001<br>
  
 
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[[Image:L21_s002.jpg|frame|none|Lecture 21, Slide 002<br>
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[[Image:L21_s003.jpg|frame|none|Lecture 21, Slide 003<br>
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[[Image:L21_s005.jpg|frame|none|Lecture 21, Slide 005<br>
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[[Image:L21_s006.jpg|frame|none|Lecture 21, Slide 006<br>
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[[Image:L21_s007.jpg|frame|none|Lecture 21, Slide 007<br>
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[[Image:L19_s007.jpg|frame|none|Lecture 19, Slide 007<br>
  
 
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[[Image:L21_s008.jpg|frame|none|Lecture 21, Slide 008<br>
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[[Image:L19_s008.jpg|frame|none|Lecture 19, Slide 008<br>
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Rogojina ''et al.'' (2003) Use of Affymetrix to spotted oligonucleotide microarrays using two retinal epithelial cell lines. Molecular Vision 9:482-96
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[[Image:L21_s009.jpg|frame|none|Lecture 21, Slide 009<br>
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Writeup in [http://bioinformatics.oxfordjournals.org/cgi/reprint/19/5/651 Pertea ''et al.'' (2003) Bioinformatics '''19''':651-652]
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(From J. Quackenbush) Bulk of genes lie on zero-line but there is evidence of differential expression
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Variance stabilization is available e.g. within the MIDAS package.
 
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Synonymous: Expression profile
 
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Revision as of 20:10, 6 December 2006

(Previous lecture) ... (Next lecture)

Comparative Genomics

...


Lecture Slides

Slide 001
Lecture 19, Slide 001
Slide 002
Lecture 19, Slide 002
Slide 003
Lecture 19, Slide 003
Slide 004
Lecture 19, Slide 004
Slide 005
Lecture 19, Slide 005
Slide 006
Lecture 19, Slide 006
Slide 007
Lecture 19, Slide 007
Slide 008
Lecture 19, Slide 008
Slide 009
Lecture 19, Slide 009
Slide 010
Lecture 19, Slide 010
Slide 011
Lecture 19, Slide 011
Slide 012
Lecture 19, Slide 012
Slide 013
Lecture 19, Slide 013
Slide 014
Lecture 19, Slide 014
Slide 015
Lecture 19, Slide 015
Slide 016
Lecture 19, Slide 016
Slide 017
Lecture 19, Slide 017
Slide 018
Lecture 19, Slide 018
Slide 019
Lecture 19, Slide 019
Slide 020
Lecture 19, Slide 020
Slide 021
Lecture 19, Slide 021
Slide 022
Lecture 19, Slide 022
Slide 023
Lecture 19, Slide 023
Slide 024
Lecture 19, Slide 024
Slide 025
Lecture 19, Slide 025
Slide 026
Lecture 19, Slide 026
Slide 027
Lecture 19, Slide 027
Slide 028
Lecture 19, Slide 028
Slide 029
Lecture 19, Slide 029
Slide 030
Lecture 19, Slide 030
Retrieved from "http://steipe.biochemistry.utoronto.ca/abc/index.php?title=Lecture_19&oldid=2558"