Difference between revisions of "BIN-SX-Ab initio prediction"
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Title | Title | ||
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− | + | (''Ab initio'' prediction principles; Rosetta, i-TASSER, EVfold; CASP; Protein design) | |
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− | ''Ab initio'' prediction principles; Rosetta, i-TASSER, EVfold; CASP; Protein design | ||
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− | <div | + | <div style="font-size:118%;"> |
− | + | <b>Abstract:</b><br /> | |
<section begin=abstract /> | <section begin=abstract /> | ||
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... | ... | ||
<section end=abstract /> | <section end=abstract /> | ||
− | + | </div> | |
− | + | <!-- ============================ --> | |
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− | == | + | <tr> |
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− | <!-- included from "./ | + | <b>Objectives:</b><br /> |
+ | ... | ||
+ | </td> | ||
+ | <td style="padding:10px;"> | ||
+ | <b>Outcomes:</b><br /> | ||
+ | ... | ||
+ | </td> | ||
+ | </tr> | ||
+ | </table> | ||
+ | <!-- ============================ --> | ||
+ | <hr> | ||
+ | <b>Deliverables:</b><br /> | ||
+ | <section begin=deliverables /> | ||
+ | <!-- included from "./data/ABC-unit_components.txt", section: "deliverables-time_management" --> | ||
+ | *<b>Time management</b>: Before you begin, estimate how long it will take you to complete this unit. Then, record in your course journal: the number of hours you estimated, the number of hours you worked on the unit, and the amount of time that passed between start and completion of this unit. | ||
+ | <!-- included from "./data/ABC-unit_components.txt", section: "deliverables-journal" --> | ||
+ | *<b>Journal</b>: Document your progress in your [[FND-Journal|Course Journal]]. Some tasks may ask you to include specific items in your journal. Don't overlook these. | ||
+ | <!-- included from "./data/ABC-unit_components.txt", section: "deliverables-insights" --> | ||
+ | *<b>Insights</b>: If you find something particularly noteworthy about this unit, make a note in your [[ABC-Insights|'''insights!''' page]]. | ||
+ | <section end=deliverables /> | ||
+ | <!-- ============================ --> | ||
+ | <hr> | ||
+ | <section begin=prerequisites /> | ||
+ | <b>Prerequisites:</b><br /> | ||
<!-- included from "./data/ABC-unit_components.txt", section: "notes-external_prerequisites" --> | <!-- included from "./data/ABC-unit_components.txt", section: "notes-external_prerequisites" --> | ||
You need the following preparation before beginning this unit. If you are not familiar with this material from courses you took previously, you need to prepare yourself from other information sources: | You need the following preparation before beginning this unit. If you are not familiar with this material from courses you took previously, you need to prepare yourself from other information sources: | ||
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*<b>Biomolecules</b>: The molecules of life; nucleic acids and amino acids; the genetic code; protein folding; post-translational modifications and protein biochemistry; membrane proteins; biological function. | *<b>Biomolecules</b>: The molecules of life; nucleic acids and amino acids; the genetic code; protein folding; post-translational modifications and protein biochemistry; membrane proteins; biological function. | ||
<!-- included from "./data/ABC-unit_components.txt", section: "notes-prerequisites" --> | <!-- included from "./data/ABC-unit_components.txt", section: "notes-prerequisites" --> | ||
− | + | This unit builds on material covered in the following prerequisite units: | |
*[[BIN-SX-Molecular_forcefields|BIN-SX-Molecular_forcefields (Molecular Forcefields)]] | *[[BIN-SX-Molecular_forcefields|BIN-SX-Molecular_forcefields (Molecular Forcefields)]] | ||
+ | <section end=prerequisites /> | ||
+ | <!-- ============================ --> | ||
+ | </div> | ||
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== Contents == | == Contents == | ||
<!-- included from "./components/BIN-SX-Ab_initio_prediction.components.txt", section: "contents" --> | <!-- included from "./components/BIN-SX-Ab_initio_prediction.components.txt", section: "contents" --> | ||
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== Self-evaluation == | == Self-evaluation == | ||
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=== Question 1=== | === Question 1=== | ||
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− | + | == Notes == | |
− | {{ | + | <!-- included from "./components/BIN-SX-Ab_initio_prediction.components.txt", section: "notes" --> |
− | + | <!-- included from "./data/ABC-unit_components.txt", section: "notes" --> | |
− | + | <references /> | |
+ | == Further reading, links and resources == | ||
+ | <!-- {{#pmid: 19957275}} --> | ||
+ | <!-- {{WWW|WWW_GMOD}} --> | ||
+ | <!-- <div class="reference-box">[http://www.ncbi.nlm.nih.gov]</div> --> | ||
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Revision as of 19:32, 26 January 2018
Title
(Ab initio prediction principles; Rosetta, i-TASSER, EVfold; CASP; Protein design)
Abstract:
...
Objectives: |
Outcomes: |
Deliverables:
- Time management: Before you begin, estimate how long it will take you to complete this unit. Then, record in your course journal: the number of hours you estimated, the number of hours you worked on the unit, and the amount of time that passed between start and completion of this unit.
- Journal: Document your progress in your Course Journal. Some tasks may ask you to include specific items in your journal. Don't overlook these.
- Insights: If you find something particularly noteworthy about this unit, make a note in your insights! page.
Prerequisites:
You need the following preparation before beginning this unit. If you are not familiar with this material from courses you took previously, you need to prepare yourself from other information sources:
- Biomolecules: The molecules of life; nucleic acids and amino acids; the genetic code; protein folding; post-translational modifications and protein biochemistry; membrane proteins; biological function.
This unit builds on material covered in the following prerequisite units:
This page is only a stub; it is here as a placeholder to establish the logical framework of the site but there is no significant content as yet. Do not work with this material until it is updated to "live" status.
Contents
Task:
- Read the introductory notes on the ab initio prdiction of protein structure.
Self-evaluation
Notes
Further reading, links and resources
If in doubt, ask! If anything about this learning unit is not clear to you, do not proceed blindly but ask for clarification. Post your question on the course mailing list: others are likely to have similar problems. Or send an email to your instructor.
About ...
Author:
- Boris Steipe <boris.steipe@utoronto.ca>
Created:
- 2017-08-05
Modified:
- 2017-08-05
Version:
- 0.1
Version history:
- 0.1 First stub
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