Difference between revisions of "BIN-PHYLO-Selective pressure"

From "A B C"
Jump to navigation Jump to search
m
m
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
<div id="BIO">
+
<div id="ABC">
−
  <div class="b1">
+
<div style="padding:5px; border:1px solid #000000; background-color:#f2fafa; font-size:300%; font-weight:400; color: #000000; width:100%;">
 
Detecting Purifying Selection Through Phylogenetic Analysis
 
Detecting Purifying Selection Through Phylogenetic Analysis
−
  </div>
+
<div style="padding:5px; margin-top:20px; margin-bottom:10px; background-color:#f2fafa; font-size:30%; font-weight:200; color: #000000; ">
−
 
+
(Purifying selection; recent selection; analysis of phylogenetic trees)
−
  {{Vspace}}
+
</div>
−
 
 
−
<div class="keywords">
 
−
<b>Keywords:</b>&nbsp;
 
−
Purifying selection; recent selection; analysis of phylogenetic trees
 
 
</div>
 
</div>
  
−
{{Vspace}}
+
{{Smallvspace}}
−
 
 
−
 
 
−
__TOC__
 
−
 
 
−
{{Vspace}}
 
−
 
 
−
 
 
−
{{STUB}}
 
−
 
 
−
{{Vspace}}
 
  
  
−
</div>
+
<div style="padding:5px; border:1px solid #000000; background-color:#f2fafa33; font-size:85%;">
−
<div id="ABC-unit-framework">
+
<div style="font-size:118%;">
−
== Abstract ==
+
<b>Abstract:</b><br />
 
<section begin=abstract />
 
<section begin=abstract />
−
<!-- included from "../components/BIN-PHYLO-Selective_pressure.components.wtxt", section: "abstract" -->
 
 
...
 
...
 
<section end=abstract />
 
<section end=abstract />
−
 
+
</div>
−
{{Vspace}}
+
<!-- ============================ -->
−
 
+
<hr>
−
 
+
<table>
−
== This unit ... ==
+
<tr>
−
=== Prerequisites ===
+
<td style="padding:10px;">
−
<!-- included from "../components/BIN-PHYLO-Selective_pressure.components.wtxt", section: "prerequisites" -->
+
<b>Objectives:</b><br />
−
<!-- included from "ABC-unit_components.wtxt", section: "notes-prerequisites" -->
 
−
You need to complete the following units before beginning this one:
 
−
*[[BIN-PHYLO-Tree_analysis|BIN-PHYLO-Tree_analysis (Title)]]
 
−
 
 
−
{{Vspace}}
 
−
 
 
−
 
 
−
=== Objectives ===
 
−
<!-- included from "../components/BIN-PHYLO-Selective_pressure.components.wtxt", section: "objectives" -->
 
 
This unit will ...
 
This unit will ...
 
* ... introduce ;
 
* ... introduce ;
 
* ... demonstrate ;
 
* ... demonstrate ;
 
* ... teach ;
 
* ... teach ;
−
 
+
</td>
−
{{Vspace}}
+
<td style="padding:10px;">
−
 
+
<b>Outcomes:</b><br />
−
 
 
−
=== Outcomes ===
 
−
<!-- included from "../components/BIN-PHYLO-Selective_pressure.components.wtxt", section: "outcomes" -->
 
 
After working through this unit you ...
 
After working through this unit you ...
 
* ... can ;
 
* ... can ;
 
* ... are familar with ;
 
* ... are familar with ;
 
* ... have begun to.
 
* ... have begun to.
 +
</td>
 +
</tr>
 +
</table>
 +
<!-- ============================  -->
 +
<hr>
 +
<b>Deliverables:</b><br />
 +
<section begin=deliverables />
 +
<li><b>Time management</b>: Before you begin, estimate how long it will take you to complete this unit. Then, record in your course journal: the number of hours you estimated, the number of hours you worked on the unit, and the amount of time that passed between start and completion of this unit.</li>
 +
<li><b>Journal</b>: Document your progress in your [[FND-Journal|Course Journal]]. Some tasks may ask you to include specific items in your journal. Don't overlook these.</li>
 +
<li><b>Insights</b>: If you find something particularly noteworthy about this unit, make a note in your [[ABC-Insights|'''insights!''' page]].</li>
 +
<section end=deliverables />
 +
<!-- ============================  -->
 +
<hr>
 +
<section begin=prerequisites />
 +
<b>Prerequisites:</b><br />
 +
This unit builds on material covered in the following prerequisite units:<br />
 +
*[[BIN-PHYLO-Tree_analysis|BIN-PHYLO-Tree_analysis (Analysing Phylogenetic Trees)]]
 +
<section end=prerequisites />
 +
<!-- ============================  -->
 +
</div>
  
−
{{Vspace}}
+
{{Smallvspace}}
  
  
−
=== Deliverables ===
+
{{STUB}}
−
<!-- included from "../components/BIN-PHYLO-Selective_pressure.components.wtxt", section: "deliverables" -->
 
−
<!-- included from "ABC-unit_components.wtxt", section: "deliverables-time_management" -->
 
−
*<b>Time management</b>: Before you begin, estimate how long it will take you to complete this unit. Then, record in your course journal: the number of hours you estimated, the number of hours you worked on the unit, and the amount of time that passed between start and completion of this unit.
 
−
<!-- included from "ABC-unit_components.wtxt", section: "deliverables-journal" -->
 
−
*<b>Journal</b>: Document your progress in your [[FND-Journal|Course Journal]]. Some tasks may ask you to include specific items in your journal. Don't overlook these.
 
−
<!-- included from "ABC-unit_components.wtxt", section: "deliverables-insights" -->
 
−
*<b>Insights</b>: If you find something particularly noteworthy about this unit, make a note in your [[ABC-Insights|'''insights!''' page]].
 
  
−
{{Vspace}}
+
{{Smallvspace}}
  
  
−
=== Evaluation ===
+
__TOC__
−
<!-- included from "../components/BIN-PHYLO-Selective_pressure.components.wtxt", section: "evaluation" -->
 
−
<!-- included from "ABC-unit_components.wtxt", section: "eval-none" -->
 
−
<b>Evaluation: NA</b><br />
 
−
:This unit is not evaluated for course marks.
 
  
 
{{Vspace}}
 
{{Vspace}}
  
  
−
</div>
+
=== Evaluation ===
−
<div id="BIO">
+
<b>Evaluation: NA</b><br />
 +
<div style="margin-left: 2rem;">This unit is not evaluated for course marks.</div>
 
== Contents ==
 
== Contents ==
−
<!-- included from "../components/BIN-PHYLO-Selective_pressure.components.wtxt", section: "contents" -->
 
  
 
{{Task|1=
 
{{Task|1=
Line 96: Line 78:
  
  
−
 
−
{{Vspace}}
 
−
 
−
 
−
== Further reading, links and resources ==
 
−
<!-- {{#pmid: 19957275}} -->
 
−
<!-- {{WWW|WWW_GMOD}} -->
 
−
<!-- <div class="reference-box">[http://www.ncbi.nlm.nih.gov]</div> -->
 
−
 
−
{{Vspace}}
 
−
 
−
 
−
== Notes ==
 
−
<!-- included from "../components/BIN-PHYLO-Selective_pressure.components.wtxt", section: "notes" -->
 
−
<!-- included from "ABC-unit_components.wtxt", section: "notes" -->
 
−
<references />
 
−
 
−
{{Vspace}}
 
−
 
−
 
−
</div>
 
−
<div id="ABC-unit-framework">
 
 
== Self-evaluation ==
 
== Self-evaluation ==
−
<!-- included from "../components/BIN-PHYLO-Selective_pressure.components.wtxt", section: "self-evaluation" -->
 
 
<!--
 
<!--
 
=== Question 1===
 
=== Question 1===
Line 136: Line 95:
  
 
-->
 
-->
 +
== Further reading, links and resources ==
 +
<!-- {{#pmid: 19957275}} -->
 +
<!-- {{WWW|WWW_GMOD}} -->
 +
<!-- <div class="reference-box">[http://www.ncbi.nlm.nih.gov]</div> -->
 +
== Notes ==
 +
<references />
  
 
{{Vspace}}
 
{{Vspace}}
  
−
 
−
 
−
{{Vspace}}
 
−
 
−
 
−
<!-- included from "ABC-unit_components.wtxt", section: "ABC-unit_ask" -->
 
−
 
−
----
 
−
 
−
{{Vspace}}
 
−
 
−
<b>If in doubt, ask!</b> If anything about this learning unit is not clear to you, do not proceed blindly but ask for clarification. Post your question on the course mailing list: others are likely to have similar problems. Or send an email to your instructor.
 
−
 
−
----
 
−
 
−
{{Vspace}}
 
  
 
<div class="about">
 
<div class="about">
Line 171: Line 120:
 
*0.1 First stub
 
*0.1 First stub
 
</div>
 
</div>
−
[[Category:ABC-units]]
 
−
<!-- included from "ABC-unit_components.wtxt", section: "ABC-unit_footer" -->
 
  
 
{{CC-BY}}
 
{{CC-BY}}
  
 +
[[Category:ABC-units]]
 +
{{UNIT}}
 +
{{STUB}}
 
</div>
 
</div>
 
<!-- [END] -->
 
<!-- [END] -->

Latest revision as of 09:26, 25 September 2020

Detecting Purifying Selection Through Phylogenetic Analysis

(Purifying selection; recent selection; analysis of phylogenetic trees)


 


Abstract:

...

Objectives:
This unit will ...

  • ... introduce ;
  • ... demonstrate ;
  • ... teach ;

Outcomes:
After working through this unit you ...

  • ... can ;
  • ... are familar with ;
  • ... have begun to.

Deliverables:

  • Time management: Before you begin, estimate how long it will take you to complete this unit. Then, record in your course journal: the number of hours you estimated, the number of hours you worked on the unit, and the amount of time that passed between start and completion of this unit.
  • Journal: Document your progress in your Course Journal. Some tasks may ask you to include specific items in your journal. Don't overlook these.
  • Insights: If you find something particularly noteworthy about this unit, make a note in your insights! page.

    • Prerequisites:
    This unit builds on material covered in the following prerequisite units:


     


    Sorry!

    This page is only a stub; it is here as a placeholder to establish the logical framework of the site but there is no significant content as yet. Do not work with this material until it is updated to "live" status.


     



     


    Evaluation

    Evaluation: NA

    This unit is not evaluated for course marks.

    Contents

    Task:


    Self-evaluation

    Further reading, links and resources

    Notes


     


    About ...
     
    Author:

    Boris Steipe <boris.steipe@utoronto.ca>

    Created:

    2017-08-05

    Modified:

    2017-10-31

    Version:

    1.0

    Version history:

    • 1.0 First live version.
    • 0.1 First stub

    CreativeCommonsBy.png This copyrighted material is licensed under a Creative Commons Attribution 4.0 International License. Follow the link to learn more.

    Sorry!

    This page is only a stub; it is here as a placeholder to establish the logical framework of the site but there is no significant content as yet. Do not work with this material until it is updated to "live" status.

    Retrieved from "http://steipe.biochemistry.utoronto.ca/abc/index.php?title=BIN-PHYLO-Selective_pressure&oldid=11690"