Difference between revisions of "RPR-Plotting"

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<div id="BIO">
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<div id="ABC">
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<div style="padding:5px; border:1px solid #000000; background-color:#b3dbce; font-size:300%; font-weight:400; color: #000000; width:100%;">
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R Plots
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Introduction to R Plots
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  </div>
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<div style="padding:5px; margin-top:20px; margin-bottom:10px; background-color:#b3dbce; font-size:30%; font-weight:200; color: #000000; ">
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(Introduction to R plots)
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  {{Vspace}}
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</div>
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<div class="keywords">
 
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<b>Keywords:</b>&nbsp;
 
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Plotting tutorial and reference
 
 
</div>
 
</div>
  
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{{Vspace}}
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{{Smallvspace}}
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__TOC__
 
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{{Vspace}}
 
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{{STUB}}
 
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{{Vspace}}
 
  
  
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<div style="padding:5px; border:1px solid #000000; background-color:#b3dbce33; font-size:85%;">
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<div style="font-size:118%;">
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<b>Abstract:</b><br />
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<section begin=abstract />
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Introductory concepts and exercises for creating graphics with R.
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<section end=abstract />
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</div>
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<!-- ============================  -->
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<hr>
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<table>
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<tr>
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<td style="padding:10px;">
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<b>Objectives:</b><br />
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This unit will ...
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* ... introduce concepts of graphics for data visualization and descrptive statistics;
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* ... teach basic plotting methods;
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</td>
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<td style="padding:10px;">
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<b>Outcomes:</b><br />
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After working through this unit you ...
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* ... know where to find models of good data visualization;
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* ... can create and customize basic plots in R;
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</td>
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</tr>
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</table>
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<!-- ============================  -->
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<hr>
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<b>Deliverables:</b><br />
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<section begin=deliverables />
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<u>
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<li><b>Time management</b>: Before you begin, estimate how long it will take you to complete this unit. Then, record in your course journal: the number of hours you estimated, the number of hours you worked on the unit, and the amount of time that passed between start and completion of this unit.</li>
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<li><b>Journal</b>: Document your progress in your [[FND-Journal|Course Journal]]. Some tasks may ask you to include specific items in your journal. Don't overlook these.</li>
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<li><b>Insights</b>: If you find something particularly noteworthy about this unit, make a note in your [[ABC-Insights|'''insights!''' page]].</li>
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</u>
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<section end=deliverables />
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<!-- ============================  -->
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<hr>
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<section begin=prerequisites />
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<b>Prerequisites:</b><br />
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This unit builds on material covered in the following prerequisite units:<br />
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*[[RPR-Functions|RPR-Functions (R Functions)]]
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<section end=prerequisites />
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<!-- ============================  -->
 
</div>
 
</div>
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<div id="ABC-unit-framework">
 
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== Abstract ==
 
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<!-- included from "../components/FND-EDA-Plotting.components.wtxt", section: "abstract" -->
 
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...
 
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{{Vspace}}
 
  
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{{Smallvspace}}
  
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== This unit ... ==
 
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=== Prerequisites ===
 
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<!-- included from "../components/FND-EDA-Plotting.components.wtxt", section: "prerequisites" -->
 
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<!-- included from "ABC-unit_components.wtxt", section: "notes-prerequisites" -->
 
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You need to complete the following units before beginning this one:
 
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*[[RPR-Introduction]]
 
  
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{{Vspace}}
 
  
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{{Smallvspace}}
  
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=== Objectives ===
 
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<!-- included from "../components/FND-EDA-Plotting.components.wtxt", section: "objectives" -->
 
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...
 
  
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__TOC__
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=== Outcomes ===
 
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<!-- included from "../components/FND-EDA-Plotting.components.wtxt", section: "outcomes" -->
 
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...
 
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=== Deliverables ===
 
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<!-- included from "../components/FND-EDA-Plotting.components.wtxt", section: "deliverables" -->
 
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<!-- included from "ABC-unit_components.wtxt", section: "deliverables-time_management" -->
 
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*<b>Time management</b>: Before you begin, estimate how long it will take you to complete this unit. Then, record in your course journal: the number of hours you estimated, the number of hours you worked on the unit, and the amount of time that passed between start and completion of this unit.
 
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<!-- included from "ABC-unit_components.wtxt", section: "deliverables-journal" -->
 
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*<b>Journal</b>: Document your progress in your [[FND-Journal|course journal]].
 
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<!-- included from "ABC-unit_components.wtxt", section: "deliverables-insights" -->
 
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*<b>Insights</b>: If you find something particularly noteworthy about this unit, make a note in your [[ABC-Insights|insights! page]].
 
  
 
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=== Evaluation ===
 
=== Evaluation ===
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<!-- included from "../components/FND-EDA-Plotting.components.wtxt", section: "evaluation" -->
 
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<b>Evaluation: NA</b><br />
 
<b>Evaluation: NA</b><br />
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:This unit is not evaluated for course marks.
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<div style="margin-left: 2rem;">This unit is not evaluated for course marks.</div>
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</div>
 
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<div id="BIO">
 
 
== Contents ==
 
== Contents ==
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<!-- included from "../components/FND-EDA-Plotting.components.wtxt", section: "contents" -->
 
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...
 
  
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{{Vspace}}
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{{Task|1=
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* Read the introductory notes on {{ABC-PDF|RPR-Plotting|graphics in R}} and concepts of graphics for descriptive statistics.
  
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* Load the <code>R-Exercise_BasicSetup</code> project in RStudio if you don't already have it open.
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* Type <code>init()</code> as instructed after the project has loaded.
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* Work through the <code>plottingIntro.R</code> script.
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}}
  
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== Further reading, links and resources ==
 
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<!-- {{#pmid: 19957275}} -->
 
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<!-- <div class="reference-box">[http://www.ncbi.nlm.nih.gov]</div> -->
 
  
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== Notes ==
 
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<!-- included from "../components/FND-EDA-Plotting.components.wtxt", section: "notes" -->
 
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<!-- included from "ABC-unit_components.wtxt", section: "notes" -->
 
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<references />
 
  
 
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== Self-evaluation ==
 
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<!-- included from "../components/FND-EDA-Plotting.components.wtxt", section: "self-evaluation" -->
 
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<b>If in doubt, ask!</b> If anything about this learning unit is not clear to you, do not proceed blindly but ask for clarification. Post your question on the course mailing list: others are likely to have similar problems. Or send an email to your instructor.
 
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<div class="about">
 
<div class="about">
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:2017-08-05
 
:2017-08-05
 
<b>Modified:</b><br />
 
<b>Modified:</b><br />
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:2017-08-05
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:2020-09-18
 
<b>Version:</b><br />
 
<b>Version:</b><br />
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:0.1
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:1.1
 
<b>Version history:</b><br />
 
<b>Version history:</b><br />
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*0.1 First stub
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*1.1 Maintenance, and mainy new examples in the plotting script
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*1.0.1 Maintenance
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*1.0 Completed to first live version
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*0.1 Material collected from previous tutorial
 
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[[Category:ABC-units]]
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Latest revision as of 09:29, 25 September 2020

Introduction to R Plots

(Introduction to R plots)


 


Abstract:

Introductory concepts and exercises for creating graphics with R.

Objectives:
This unit will ...

  • ... introduce concepts of graphics for data visualization and descrptive statistics;
  • ... teach basic plotting methods;

Outcomes:
After working through this unit you ...

  • ... know where to find models of good data visualization;
  • ... can create and customize basic plots in R;

Deliverables:

  • Time management: Before you begin, estimate how long it will take you to complete this unit. Then, record in your course journal: the number of hours you estimated, the number of hours you worked on the unit, and the amount of time that passed between start and completion of this unit.
  • Journal: Document your progress in your Course Journal. Some tasks may ask you to include specific items in your journal. Don't overlook these.
  • Insights: If you find something particularly noteworthy about this unit, make a note in your insights! page.
    •

    Prerequisites:
    This unit builds on material covered in the following prerequisite units:


     



     



     


    Evaluation

    Evaluation: NA

    This unit is not evaluated for course marks.

    Contents

    Task:

    • Read the introductory notes on graphics in R and concepts of graphics for descriptive statistics.
    • Load the R-Exercise_BasicSetup project in RStudio if you don't already have it open.
    • Type init() as instructed after the project has loaded.
    • Work through the plottingIntro.R script.



     


    About ...
     
    Author:

    Boris Steipe <boris.steipe@utoronto.ca>

    Created:

    2017-08-05

    Modified:

    2020-09-18

    Version:

    1.1

    Version history:

    • 1.1 Maintenance, and mainy new examples in the plotting script
    • 1.0.1 Maintenance
    • 1.0 Completed to first live version
    • 0.1 Material collected from previous tutorial

    CreativeCommonsBy.png This copyrighted material is licensed under a Creative Commons Attribution 4.0 International License. Follow the link to learn more.

    Retrieved from "http://steipe.biochemistry.utoronto.ca/abc/index.php?title=RPR-Plotting&oldid=11746"