Difference between revisions of "RPR-GEO2R"

From "A B C"
Jump to navigation Jump to search
m
m
Line 77: Line 77:
 
=== Evaluation ===
 
=== Evaluation ===
 
<!-- included from "../components/RPR-GEO2R.components.wtxt", section: "evaluation" -->
 
<!-- included from "../components/RPR-GEO2R.components.wtxt", section: "evaluation" -->
−
<!-- included from "ABC-unit_components.wtxt", section: "eval-INT-TBD" -->
+
<!-- included from "ABC-unit_components.wtxt", section: "eval-TBD" -->
−
<b>Evaluation: Integrated Unit</b><br />
+
<b>Evaluation: TBD</b><br />
−
:This unit should be submitted for evaluation for a maximum of 10 marks. Details TBD.
+
:This unit can be submitted for evaluation for a maximum of 6 marks. Details TBD.
  
 
{{Vspace}}
 
{{Vspace}}

Revision as of 17:08, 31 October 2017

GEO2R


 

Keywords:  Programming for analysis of GEO datasets


 



 


Sorry!

This page is only a stub; it is here as a placeholder to establish the logical framework of the site but there is no significant content as yet. Do not work with this material until it is updated to "live" status.


 


Abstract

...


 


This unit ...

Prerequisites

You need the following preparation before beginning this unit. If you are not familiar with this material from courses you took previously, you need to prepare yourself from other information sources:

  • The Central Dogma: Regulation of transcription and translation; protein biosynthesis and degradation; quality control.

You need to complete the following units before beginning this one:


 


Objectives

...


 


Outcomes

...


 


Deliverables

  • Time management: Before you begin, estimate how long it will take you to complete this unit. Then, record in your course journal: the number of hours you estimated, the number of hours you worked on the unit, and the amount of time that passed between start and completion of this unit.
  • Journal: Document your progress in your Course Journal. Some tasks may ask you to include specific items in your journal. Don't overlook these.
  • Insights: If you find something particularly noteworthy about this unit, make a note in your insights! page.


 


Evaluation

Evaluation: TBD

This unit can be submitted for evaluation for a maximum of 6 marks. Details TBD.


 


Contents

GEO regex example 

   ===Labeling===

   Write an R script that creates meaningful labels for data elements from metadata and shows them in a plot. Use the sample data below - or any other data you are interested in.



   Sample input data from GEO, and task description ...



Retrieved from "http://steipe.biochemistry.utoronto.ca/abc/index.php?title=RPR-GEO2R&oldid=10391"